Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKTRKDVCVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRPADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFLLQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGKTSEQVEAEARPSC
2E98 Chain:B ((19-243))
-----------RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRF---------------
General information:
TITO was launched using:
RESULT:
Template:
2E98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137248 for 1591 contacts (-86.3/contact) +
2D Compatibility (PS) -24270 + (NN) -18900 + (LL) 2256
1D Compatibility (HY) -22000 + (ID) 6100
Total energy: -206262.0 ( -129.64 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2E98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E98-query.scw
PDB file :
Tito_Scwrl_2E98.pdb
: