Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEA----LKDAGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4QBI Chain:B ((1-212))
MNLVLMGLPGAGKGTQAEKIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEDIGRKIDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGY------LRNVNGEQDIEKVFADVRELL-
General information:
TITO was launched using:
RESULT:
Template:
4QBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89320 for 1525 contacts (-58.6/contact) +
2D Compatibility (PS) -22528 + (NN) -10329 + (LL) 24
1D Compatibility (HY) -17200 + (ID) 5100
Total energy: -144453.0 ( -94.72 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4QBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBI-query.scw
PDB file :
Tito_Scwrl_4QBI.pdb
: