Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLE----GQPYVLANS------CKPHDCGNNRLLVAFRGDKSAAYGLQVSL-PDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK
2QUO Chain:A ((4-126))
----KEILDLA-----------AATERLNLTDALNS-----------NPAGNLYDWRSSNSYPWTQKLNLHLTITATGQKYRILASKIVDFNIYSNNFNNLVKLEQSLGDGVKDHYVDISLDAGQYVLVMKANSSYSGNYPY--------SILFQKF-------
General information:
TITO was launched using:
RESULT:
Template:
2QUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7292 for 699 contacts (-10.4/contact) +
2D Compatibility (PS) -11630 + (NN) 889 + (LL) 2140
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -23343.0 ( -33.39 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_2QUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QUO-query.scw
PDB file :
Tito_Scwrl_2QUO.pdb
: