Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHA---VCLEMLTRLARAAGSAGMVGGQAIDLGS----VGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
| 4LLT Chain:B ((35-311)) | --------VQAHFDKVLAAFEPLP------IVEAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVT----HPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDE--ITRLQQGKTGALIGWSAQAGA----RLAQADTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMSLIDEACDSLATYGAKADTLRETARFVVRRTH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106298 for 2336 contacts (-45.5/contact) +
2D Compatibility (PS) -30510 + (NN) -29276 + (LL) 2652
1D Compatibility (HY) -17600 + (ID) 6450
Total energy: -187482.0 ( -80.26 by residue)
QMean score : 0.468
|
|
|