Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED----GRGVAWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWV-GAYRGEIDE--ALYPRWPYDVDPIAVLSLKDN--PPPPLEGLS--RFRLSWMRGYAFARYFPT---LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRITDVTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE |
| 3KBR Chain:A ((10-236)) | ------------------RILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSI-PYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHP-ELCAVHPQPFDFAEKAYLLPRD---EAFKRYVDQWLHIAEQSGLLRQRMEHWL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110521 for 1648 contacts (-67.1/contact) +
2D Compatibility (PS) -22811 + (NN) -9589 + (LL) 2804
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -144567.0 ( -87.72 by residue)
QMean score : 0.436
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