Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPRPSLTLTLLQAREAAMSFFRPSLNQHGLTEQQWRVIRILRQQ--GEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELKKIKP
3JW4 Chain:A ((12-148))
----DTPYSYLIRSIGMKLKTSADARLAELGLNSQQGRMIGYIYENQESGIIQKDLAQF------SITSMLQGLEKKGYIERR--------KNIYVLPKGAALVEEFNNIFLEVEESITKGLTKDEQKQLMSILIKVNRSM-
General information:
TITO was launched using:
RESULT:
Template:
3JW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50064 for 705 contacts (-71.0/contact) +
2D Compatibility (PS) -13354 + (NN) -8596 + (LL) 868
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -79046.0 ( -112.12 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3JW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JW4-query.scw
PDB file :
Tito_Scwrl_3JW4.pdb
: