Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD---------------------------------------------------------------------------------------
2K5I Chain:A ((1-162))
MKLSRLVPGVPARIKRLEV--SGELHEKLVGMGFVPGEEIEIVQVAPLGDPIVCKIGNRNITLRKREADLIEVEVVGGELPLILADDGTYEITKLNGGRRFLFRMKNLGIESGKKIQVSGRRYYIEGREIDLGYGEATKIWVRRVSDAGEESHPQKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2K5I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55873 for 493 contacts (-113.3/contact) +
2D Compatibility (PS) -7987 + (NN) -3482 + (LL) 348
1D Compatibility (HY) -8000 + (ID) 1100
Total energy: -76094.0 ( -154.35 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_2K5I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5I-query.scw
PDB file :
Tito_Scwrl_2K5I.pdb
: