Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGK----------------------GLKSLVKAPLEL-LKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGT--A---NRSLAPI--------ARR--VCEAFPDTFP--A-S-----DKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEF--LVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3OTI Chain:A ((19-397)) | RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEH---ADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGAT--VGLLAADRAGVPAVQRNQSAWRTRGMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGAVLGDRLP------PVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE-VDADFVLALGDLDISPLG----TLPRNVRAVGWTP-LHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPR----DQFQHTAREAVSRRGIGLVSTSDKV--D--ADLLRRLIGDESLRTAAREVREEMVALPTPAETVRRIVERIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184769 for 2861 contacts (-64.6/contact) +
2D Compatibility (PS) -34951 + (NN) -8080 + (LL) 1216
1D Compatibility (HY) -4800 + (ID) 3100
Total energy: -234484.0 ( -81.96 by residue)
QMean score : 0.469
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