Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLDIKNLSVRFGD-TTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLK----GRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKA-----IPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
| 3TUZ Chain:D ((24-274)) | --MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKS-TLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKARRQI-----GMIFQH--FNLLSSRTVFGNVALPLELDNTPKDE-VKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPE------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206642 for 1965 contacts (-105.2/contact) +
2D Compatibility (PS) -26420 + (NN) -13588 + (LL) 4904
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -267096.0 ( -135.93 by residue)
QMean score : 0.497
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