Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLL--AATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVEL--GSMP--VMRIISQ-ATRVIAEGEVL-QLSKVRDASTTEE--TYMEVIRG-KTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
| 3KRO Chain:A ((37-271)) | -------------------------------------YSLLAGGKRVRPMLCIAACELVG--GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRLNREAQEQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65015 for 1576 contacts (-41.3/contact) +
2D Compatibility (PS) -22231 + (NN) -10944 + (LL) 8376
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -107164.0 ( -68.00 by residue)
QMean score : 0.338
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