Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAK-PSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQA-VGSIPPHSVLVFDVELLEIL |
1QPL Chain:A ((1-106)) | ------------------------------------------------------------------------------------------------------GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59953 for 727 contacts (-82.5/contact) +
2D Compatibility (PS) -10763 + (NN) 153 + (LL) 7204
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -72509.0 ( -99.74 by residue)
QMean score : 0.499
|
|
|