Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAA-GH-DLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL--RGLDGVIFSAGYYPSRP-RRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLGELDIGP-----T-TGRVITAIGNGEMTHYVAG--QRNVIDAAEAGRGLLMALERGR----IGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 2YY7 Chain:A ((1-312)) | ----------MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEV--VNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTP----KENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEF-TITY--EPD---------------F-R--Q-KI--ADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153675 for 2529 contacts (-60.8/contact) +
2D Compatibility (PS) -32439 + (NN) -13821 + (LL) 2540
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -206695.0 ( -81.73 by residue)
QMean score : 0.469
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