Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTL----DVRDRAAMSAAVDNLPEEFATLRGLINNAGLA-LGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF--SLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
3P19 Chain:C ((16-251))
-KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQ--EANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG-TIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLS------------------GGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQ-----------
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124906 for 1743 contacts (-71.7/contact) +
2D Compatibility (PS) -22418 + (NN) -6012 + (LL) 2524
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -169812.0 ( -97.43 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: