Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPD--DERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALN----ITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
1W9G Chain:A ((1-102))
-MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQ--TYQPYNKDWIKEKIYVLLRRQAQQA-----
General information:
TITO was launched using:
RESULT:
Template:
1W9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11163 for 557 contacts (-20.0/contact) +
2D Compatibility (PS) -10718 + (NN) -5442 + (LL) 452
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -31021.0 ( -55.69 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1W9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W9G-query.scw
PDB file :
Tito_Scwrl_1W9G.pdb
: