Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGR---SY-----SKPMLST-----GFS-----K-----NKDADGL-------A---MAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EGLEAHLSDGEV-IPCDLVVSAVGLRPRTELAFA--AGLAVN-RGIVVDRSLRTSHANIYALGDCAEVDGL--NLLYVMPLMACARALAQTLAGNPS-QVAYGPMPVTVKTPACPLVVSPPPRGMDGQW------L-------------V---E-GSGTDLKVLCRD-TAGRVIGYALTGAAVNEKLALNKELPGLMA |
| 1ONF Chain:A ((2-467)) | ---VYDLIVIGGGSGGMAAARRAARHN--AKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFL--------------EGRNILIAVGNKPVFPPVKGIE--NTISSDEFFN---I----KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCCMVK--FYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFSHP-PIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIGLNADEIVQGFAV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ONF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228998 for 2745 contacts (-83.4/contact) +
2D Compatibility (PS) -36712 + (NN) -9586 + (LL) 2604
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -290542.0 ( -105.84 by residue)
QMean score : 0.446
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