Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTGDSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLLEEEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPCDVFFPAFPGDDILSNKSTAAQAAAPAESVFVPFCPELGREKDNEATYRPIFISKTFSDNGVPYDFVVLEK
3TQ8 Chain:A ((2-131))
---IITLIAAMDKNRLIGRNNELPW-HLPADLAHFKSITLG---------------------------------KPIVMGRRTFDSIG---KPLPHRRNIVITQQKNLI-----------IEGCDIFYSLDDALSALT-----KEPEVIIIGGARIFKEAL--PKADKMILTIINHSFEGDVYFPEWN--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131971 for 957 contacts (-137.9/contact) +
2D Compatibility (PS) -14436 + (NN) -8418 + (LL) 5624
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -164351.0 ( -171.74 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ8-query.scw
PDB file :
Tito_Scwrl_3TQ8.pdb
: