Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNLNASQANHRNFILTGIPGTPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEPTYYFLSILALTDVSLSMSTLPSMLSIYWFNAPQIVFDACIMQMFFIHVFGIVESGVLVSMAFDRFVAIRNPLHYVSILTHDVIRKTGIAVLTRAVCVVFPVPFLIKCLPFCHSNVLSHSYCLHQNMMRLACASTRINSLYGLIVVIFTLGLDVLLTLLSYVLTLKTVLGIVSR--------GERLKTLSTCLSHMSTVLLFYVPFMGAASMIHRFWEH-LSPVVHMVMADIYLLLPPVLNPIVYSVKTKQI |
1U19 Chain:A ((42-314)) | ---------------------------MLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRY---IP-EGMQCSCGIDYYT---PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGV-AFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258274 for 2121 contacts (-121.8/contact) +
2D Compatibility (PS) -25910 + (NN) 3489 + (LL) 1340
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -283055.0 ( -133.45 by residue)
QMean score : 0.179
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