Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MITFLPIIFSILIVVIFVIGNFANGFIALVN---------SIEWVKRQKISFVDQILTALAVSRVGLLWVLLLHWYATQLNPAFYSVEVRITAYNVWAVTNHF---SSWLAT------------------SLSMFYLLRIANF-SNLIFLRI---KRRVKSVVLVILLGPLLFLVCHLFVINMD----ETVWTKEYEGNVT----WKIKLRSAMYHSN--------MTLTMLANFVPLTLTLISFLL----------LICSLCKHL--KKMQLHGKGSQ-------------------DPSTKVHIKALQTVTSFLLLCAIYFLSMIISVCNFGRLEKQPVFMFC-------QAIIFSYPSTHPFILIL---GNKKLKQIFLSVLRHVRYWVKDR--SLRLHRFTRGALCVF------------------------------------ |
2I2X Chain:A ((3-461)) | AKRYTSMAYANADEMTFGVSKYPVKAGLDLEIG--AGYTIPEINYAPRPEAGASKEKLIKEYERITTDVMERMVQVGFPAIILETEHVQQMSNNPSWGAEVAHAQKTIMEKYHDEYGIKCALRHTIGDIRENREFLQLRGDKYSVFLEAFEQCAENGADLLSVESMGGKEVFDYAVLRNDIPGLLYSIGCLGSIDMELIWTDISKIAKKTGTISAGDTDCAQANTAMFIGGGLLNKNLAHTIAVIARAISAPRSLVAYEAGAVGPGKDCGYENIIVKAITGMPMTMEGKTSTCAHSDVMGNLVMQCCDCWSNESVEYHGEFGGTTVQCWSETLAYDCALMNTALETKNDKVLRDLMMLSDRYRDPQAYMLAYDNAYRVGQSIVKDGDNIYLRAKNAAIECCNIIEEGAAGKLELSRFETKALADAKAALEALPDDMDKFMDDCLTKYKSEVKVFKPENYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -344340 for 2564 contacts (-134.3/contact) +
2D Compatibility (PS) -33141 + (NN) -5869 + (LL) 52
1D Compatibility (HY) -1600 + (ID) 2500
Total energy: -387398.0 ( -151.09 by residue)
QMean score : 0.198
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