Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MITFLPIIFSILI-------VVTFVIGNFANGFIALVNSIEW---------------------------FKRQKISFADQILTALAVSRVGLLWVLVLNWYATELNPAFNSIEVRITAY--------------NVWAVINHFSN-WLATSLSIFYLLKIANFSNLIFLHLKRRV-KSVVLVILLGPLLFLVCHLFVINMNQIIWTKEYEGNMTWKIKLRSAMYLSNTTVTILANLVPFTLTLISFLLLICSLCKHLKK--MQLHGKGSQDPSMKVHIKALQTVTSFLLLCAIYFLSIIMSVWSFESLENKPVFMFCEAIAFSYPSTHPFILIWGNKKLKQTFLSVLWHVRYWVKGEKPSSS----------------------------- |
2QB7 Chain:A ((5-397)) | RKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264705 for 2288 contacts (-115.7/contact) +
2D Compatibility (PS) -32055 + (NN) -4425 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -310835.0 ( -135.85 by residue)
QMean score : 0.139
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