Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------MADKVQTTL-----LFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLLCVILLDCFILVLYPDVYATGKEMRIIDFFWTLTNHLSIWFATCLSIYYFFKIGNFFHP------LFLWMKWRIDRVISWILLGCVVLSVFISLPATENLNADFRF-----------CVKAKRKTNLTWSCRVNKTQHASTKLFLNLATLLPFCVCLMSFFLL--ILSLRRHIRRMQLSA------------TGCRDPSTEAHVRALKAVISFLLLFIAYYLSFLIATSSYFMPETELAVIFGES-IALIYPSSHSF---------------ILIL-----GNNKLRHASLKV-----------IWKVMSILKGRKFQQHKQI--------------------------- |
| 3T5T Chain:A ((4-477)) | EIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRRASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSDAREGWADFGRFTRDFADAILKSSAQSAD----PVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLPQLPEGIEEWADGHRLVVHSGRTDPIKNAERAVRAFVLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255026 for 2205 contacts (-115.7/contact) +
2D Compatibility (PS) -32587 + (NN) 717 + (LL) 716
1D Compatibility (HY) 9600 + (ID) 1550
Total energy: -278130.0 ( -126.14 by residue)
QMean score : 0.202
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