Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVVDPQQLGMFTEGELMSVGMDTFIHRIDSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQEMLD-----SVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISDLGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVVPYLEDLHGADEDEDLFDIEDDIIYTQDFTVPGQVPEEEASHNGQRRGLPKAVCMNGTEAAQLSTKSRAEGRAPNPARKACSASSKIRRLSACKQQ |
4I6H Chain:A ((29-288)) | -----------------------------------------------RYSRGKTLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVSK-PHQREKIDKEIELHRILHHKHVVQFYH--YFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRY-------YLRQIVSGLKYLHEQEILHRDLKLGNFFINESMELKVGDFGLAARLEPL--EHRRRTICGTPNYLSPEVLNKQG--HGAESDIWALGCVMYTMLLGRPPFETTNLKETYRSIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFTQGFTPDRLSSSCCHTVPDFH------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97906 for 1965 contacts (-49.8/contact) +
2D Compatibility (PS) -26940 + (NN) -9364 + (LL) 9712
1D Compatibility (HY) -18800 + (ID) 4350
Total energy: -147648.0 ( -75.14 by residue)
QMean score : 0.404
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