Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRS--PRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSL-HHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYK--ASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAY-YAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 1T46 Chain:A ((27-305)) | ---------------------------------FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL----TEREALMSELKVLSYLGNHMNIVNLLGACT-IGGPTLVITEYCCYGDLLNFLRRKRDSF---LALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG-RITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--------------DSKFYKMIKEGFRMLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86738 for 2056 contacts (-42.2/contact) +
2D Compatibility (PS) -28544 + (NN) -20297 + (LL) 2284
1D Compatibility (HY) -14400 + (ID) 2900
Total energy: -150595.0 ( -73.25 by residue)
QMean score : 0.423
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