Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--EPNTSPSSAPSPSAGCSTIIYDMVDCVSFLSVGSKDKKP-SPSCCSGFETVLNTDPKCICEALK-------SSAELGIDVD----LKRAATLPSACGVSAPPISNCNGENIAD--------
1HSS Chain:A ((5-124))
MCYPGQ--AFQVPALPACRPLLRLQC-------NGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27415 for 569 contacts (-48.2/contact) +
2D Compatibility (PS) -9502 + (NN) -5790 + (LL) 404
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -45803.0 ( -80.50 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: