Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEWLISDQLINYNYAVKFMEKKIQQIHNNSSDELVWLLQHPPLYTAGISATDDDVVEKLLPIYKTGRGGKYTYHGPGQRIIYLMLNLKKRNKCDIKLYIRELGSWIINVLKHFNIFGEFKEDRIGVWVNNNGVEEKIAAFGIRLRKWITYHGIALNFSPDLSHYKGIIPCGLKGYGVTSIKELGVKAPLFKLDNILKKEFYKIF- |
| 1DVO Chain:A ((33-184)) | PPKWKVKKQKLA---EKAAREAELTAKKAQARQALSIYLNLP---------TLDEAVNTLKPWWPGLFDGDTPRLLACGIRDVLLEDVAQRN---IPLSHKKLRRAMKAITRSESYLCAMKAGA-CRYDTEGYVTEHI--------------------------------------SQEEEVYAAERLDKIRRQNRIKAELQAVLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33996 for 930 contacts (-36.6/contact) +
2D Compatibility (PS) -15853 + (NN) -5175 + (LL) 2912
1D Compatibility (HY) 0 + (ID) 1250
Total energy: -53362.0 ( -57.38 by residue)
QMean score : 0.332
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