Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRK-WDRPGGGGGESTIIYGDVFEKVGVNISKVYGKFADSVVNEIPGA-------------------SESNGEFWAS--GISLVSHMQSPLVPAAHMNTR-----LIYTSKQWFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYL--HIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGNPDAIMMSMPPLVKWM------- |
| 1NVM Chain:B ((1-312)) | MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQATIPMVAAVSRVAKVHYAEIVASISSKSAGPGTRANIDEFTETTSKAIEVIGGAAKGKAIIIMNPA-------EPPLIMRDTVYVLSAAADQAAVAASVAEMVQAVQAYVPGYRLKQQVQFDVIPESAPLNIPGLGRFSGLKTSVFLEVEGAAHYLPAYAGNLDIMTSAALATAERMAQSMLNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5009 for 2252 contacts (2.2/contact) +
2D Compatibility (PS) -27201 + (NN) 6506 + (LL) 432
1D Compatibility (HY) 3200 + (ID) 1150
Total energy: -13204.0 ( -5.86 by residue)
QMean score : 0.173
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