Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
2HMS Chain:C ((7-144))
--KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNY--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104635 for 1055 contacts (-99.2/contact) +
2D Compatibility (PS) -14928 + (NN) -1588 + (LL) 6000
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -135951.0 ( -128.86 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2HMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HMS-query.scw
PDB file :
Tito_Scwrl_2HMS.pdb
: