Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKVIMQDLDQIIALENIGFSPEEAATR----EALKLRIEQIQETFIVAEKNDEVIGYINGPVIKERYISDDLFKNVSINNSEGGYISVLGLVVAPNYQGQGIAGRLLNYFETLAKNHHRHGVTLTC---RESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNIKKDDEV
2DXQ Chain:A ((6-144))
ISLRAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNL------------TRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQNKTG----------------------
General information:
TITO was launched using:
RESULT:
Template:
2DXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78908 for 887 contacts (-89.0/contact) +
2D Compatibility (PS) -14785 + (NN) -10243 + (LL) 1872
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -106764.0 ( -120.37 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2DXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXQ-query.scw
PDB file :
Tito_Scwrl_2DXQ.pdb
: