Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MFFKFI--------LCLSLGIFAWAKEVIPTPSTP-------LT--PSKRYSINLMTENDGYINPYIDEYYTAGNQIGFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISL---------------AQDMYTPSLANRKLVHLHDN-----HPYGGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLI-----HKWGHDPQFYGWNTQLKNEFIF------ELHYQLLKKVPLL------KTRFFSMELMPGFNVEL----GNARDYFQLGSLF------RAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWRSLRVAFTITDISKTFQS-QPKHHQIGTLELNFAF |
| 3WFS Chain:C ((23-388)) | LNFYLSYFDDVAKVLPREHYCFIVG--GWVRDRILGEPVGYNIDVDFLTTADPVELAKNFAKRIGGHFFVFEPTIASVVLHLPPYRYRFDFSPLKGKDLEKALIEDLKERDFTANAIAVNLDDVLTIVYDPTGGIKDLEQGLLRPVSIENLKRDPVRVLRGFRIAIEKNLQLTEDFYEFVKEDPRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGEFTDVELLKWGALFHDIGKPQTTFYEHDKVGAQIVREIGER-LRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14308 for 1753 contacts (8.2/contact) +
2D Compatibility (PS) -26511 + (NN) 1727 + (LL) 164
1D Compatibility (HY) 14000 + (ID) 750
Total energy: 2938.0 ( 1.68 by residue)
QMean score : -0.126
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