Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLG-EEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKSDNPQANSMQDSMTHENFNNAYPTNYNAPSQDPFSQAQSYPQNAYTKENSQAQPSKYQNSVPEINIDEEEIPF
3EIV Chain:A ((4-120))
-ETVITVVGNLVDDPELRFTPSGAAVAKFRVASTP----------DGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRS--------RTVYELDVDEVGASLRSATAKVTKT-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52722 for 642 contacts (-82.1/contact) +
2D Compatibility (PS) -10596 + (NN) -5160 + (LL) 3496
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -70132.0 ( -109.24 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3EIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EIV-query.scw
PDB file :
Tito_Scwrl_3EIV.pdb
: