Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKKYLICSDIDGTLLRQDQTV-SKKTRDLIQTLEKDGHIFSISTGRMYRSAREVGFQVSSSGHVIASNGSYAAIRDEQLLKTTLEEKAIRSTYDIMSDFDLP--LFFFSTNTLFYTKEP-PAFFQNLADK-SRLDTGHNSFSLVSINEKGIFDENMHQFLNAIVVAE--EDASKLTEVRAAL-NEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRERIITFGDGENDIGMLQYAGTGVAMANASDNVKAAANHLTDTNEADGVYKFLKEFIS |
| 3L7Y Chain:A ((36-300)) | --SVKVIATDMDGTFLNSKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVN--SF-------SPL-P--ERFFKLTLQVKEEESAQIMKAIADYKTSQRLVG--TASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89546 for 2156 contacts (-41.5/contact) +
2D Compatibility (PS) -27366 + (NN) -12573 + (LL) 1068
1D Compatibility (HY) -14400 + (ID) 2750
Total energy: -145567.0 ( -67.52 by residue)
QMean score : 0.497
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