Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNP-KT-ATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKF-YDSYLYGHGCHTIDQVLSYFGK-PDNIHYDVRQLLGEGRMNDYFDLDLYYG-VTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3RC1 Chain:A ((27-345)) | PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFG-GEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAASFTIPPKP-QGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHER-DRDVVVGGNALLTTRQGVTAQLTFGMEHA-YTNNYEFRGSTGRLWMNRVFTPP-ATYQ---PV---------VH---IERQD---H-AEQFVLPAHDQFAKSIRAFAQAVLSGEHPREWSEDSLRQASLVDAVRTGAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118522 for 2707 contacts (-43.8/contact) +
2D Compatibility (PS) -33658 + (NN) -10050 + (LL) 312
1D Compatibility (HY) -800 + (ID) 2500
Total energy: -165218.0 ( -61.03 by residue)
QMean score : 0.416
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