Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSTAKERQLKIVNRLKVEQFM----RIIDLVEFVNYSEATVKRDLVELEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNE-RSN-ETSKIRIADIAKSLIRDDMVIFLD-SSSTSLHLIDVLSKFDGLQIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAKAYNDALTYNADIAFVSCRGIDYDKGA-TETHEGEALIKQAFRRQSSS-LVLLVTEEKVGHKFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY |
3EDP Chain:A ((7-236)) | KKPLFEVIASKIKDSINRDEYKTGMPNETALQEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLT----AQNILEMTGVMKNLKKDIKDFYIRKAGKFYAEIFGMKENELVYSIKFVQKSEHGATLDRLILPLGLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAG---------NEQIKNMHLNENDPVFKLSSVFYAENDMPIAIQYHYEDAEST---------------KYVVDFN-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43734 for 1489 contacts (-29.4/contact) +
2D Compatibility (PS) -22747 + (NN) -1883 + (LL) 3736
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -69078.0 ( -46.39 by residue)
QMean score : 0.261
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