Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIPYRLNN--------KGGLIVTLPGK--DETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSR-H----LDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPA---ETVEYLAVDMGALGDGQ-----------------------T---------------SDE----------------YTVSICA---------------------------------------------KDG----SGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 3RZA Chain:A ((19-394)) | --GMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIE--VPKLYLTSHMDTVVP-----------------AINVKPI--------------------------------------------------------------------------VKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTII-SGGGSDGSIINT--FGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50566 for 2097 contacts (-24.1/contact) +
2D Compatibility (PS) -27457 + (NN) -15073 + (LL) 6756
1D Compatibility (HY) -6000 + (ID) 2800
Total energy: -95140.0 ( -45.37 by residue)
QMean score : 0.486
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