Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSFQIKTKVAFGTNSLQVLKE----IKNKNVWIICD---RFLADGEGLQGLIGQLDASNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGI----------YYFAKRLEKIN-ISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQLVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRETEQKYAEMARICGIASRSDSNETAVRLL--RERIVAMMEHMQM----PRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII |
| 3BFJ Chain:D ((16-385)) | -----------FGPNAISVVGERCQLLGGKKALLVTDKGLR--KDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPE---KFADIAELMG------ENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLGV-KETDFPYMAEM---ALKDGNAFSNPRKGNEQEIAAIFRQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153300 for 3139 contacts (-48.8/contact) +
2D Compatibility (PS) -36995 + (NN) -11747 + (LL) 2640
1D Compatibility (HY) -23200 + (ID) 7000
Total energy: -229602.0 ( -73.14 by residue)
QMean score : 0.460
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