Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQTEQ-LQANHQFTPDSIGFI---LLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSK--ELNYMGIEVDDLLIDLSASIAEIIG-------SSAQFIQEDAVRPQI--LKESDVIISDLPIGYYPNDDIA-KRYAVS----------SSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTS--PQSDLLKEWLKGYADVIAVLTLPE-TIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSKNMIE |
| 3S1S Chain:A ((271-529)) | -------------------------------------------------------------RRILTGDELAELIHDI-ATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKGSS-VEEIEVLDSFTPLEQVDLHNLKRALSNSSNEQIIQPMGMEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96470 for 1832 contacts (-52.7/contact) +
2D Compatibility (PS) -24820 + (NN) -9532 + (LL) 5580
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -133292.0 ( -72.76 by residue)
QMean score : 0.345
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