Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCSTKEMRLVYRDFLLQANQENKQITVLEADLSSSMS-----TNVLASEF-GKRYINLGIMEAEMVGLAAGLAIK--GYKPYLHTFGPFASRRVFDQVFLSLGYSQLSATIIGSDAGVSAEMNGGTHMPFEELGLLRLIPKATIFEVSDDIQFEAILKQTLS-IDGLKYIRTIRKAPTAVYE-GCEDFSKGFI-QLR----QGKDIALVASGIMVSRAIEAADYLKELGIEASVIDLFKIKPLPEEL--KPL-LI---DQSIVTIENHNRIGGIGSALCEWLSMEKDTTVSRMGIDERFGQVGQMKYLLEEYGLAVKDIVEHCKSIYKS |
| 1ITZ Chain:A ((366-675)) | -----DATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTAEERNVRFGVREHGMGAICNGIALHSPGFVPYCATFFVFT-DYMRGAMRIS-ALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPHLPGTSIEGVEKGGYTISDNSTGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTL-GW----QKYVGA----QGKAIGI-DKFGASAPAGTIYKEYGITVESIIAAAKSF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ITZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165620 for 2597 contacts (-63.8/contact) +
2D Compatibility (PS) -30563 + (NN) -6729 + (LL) 680
1D Compatibility (HY) -9600 + (ID) 2950
Total energy: -214782.0 ( -82.70 by residue)
QMean score : 0.455
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