Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLGSIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDDSTYLGIVDGKGADLYALGKLLQEELGEQ-----IAIGSSPQMLAKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNFLF-VDELASIRDSCGSSKQ------GKELWNEILQN----LGLIARKGRQAGCHLLLSTQDPNAENIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVS---DRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNILPNY--------------- |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYT-------------------------------EHIIVLF---ETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGR---IIIQAIVPLEK--------EKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMI---DLHLKLKDDSRRP-----FDKQIRYEAGYRF-VKGWREMVDTLHMPW-----------RDEGVYL-ITGGAG----SLGLLFAKEIANRTGRSTIVLTGRSVLSEDKENELEALRSIGAEVVYREADVSDQHAVRHLLEEIKERYGTLNGIIHGAGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAANSFMDAFAEYRRSLAASKKRFGSTISFNWPLWEEGGMQVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVSDKPQVFVMEGQLQKMKQKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88422 for 3105 contacts (-28.5/contact) +
2D Compatibility (PS) -40565 + (NN) -8551 + (LL) 5760
1D Compatibility (HY) -11200 + (ID) 3400
Total energy: -146378.0 ( -47.14 by residue)
QMean score : 0.209
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