Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYIEILGQNAKKASQSVARLSTASKNEILRDLARNIVADTETILTENARDVAKAKDNGISEIMVDRLRLNKDRIQAIANGIYQVADLADP-IGQVVSGYTNLDGLKILKKRVPLGVIAMIFE-SRPNV-SVDAFSLAFKTGNAIILRGGKDAIFSNTALVNCMRQTLQDTGHNPDIVQLVEDTSHVVAEELMQATDYVDVLIPRGGAKLIQTVKEK-SKIPVIETGVGNVHIYIDEFADLDMAAKIVINAKTQR-PSVCNAAEGLVVHQAIAKGFLSQLEKMLKESNQSVEFRADEEA--------------------------------------LQLL-ENAVA--ASESDYATEFLDYIMSVKVVDSFEQAISWINKYSSHHSEAIITNNISRAEIFQDMVDAAAVYVNASTRF-TDGFVFGLGAEIGISTQKLHARGPMGLEALTSTKYYINGTGQVRE |
| 3PQA Chain:A ((34-464)) | -EEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKP----IKQAR-VE-------VERSIGTFKLAAFYVKEHRDEVIP----SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAG-EVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKV----LNV-GNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGR----EGVKYAMEEMSNIKTIIISK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189018 for 3345 contacts (-56.5/contact) +
2D Compatibility (PS) -41990 + (NN) -16469 + (LL) 1288
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -261789.0 ( -78.26 by residue)
QMean score : 0.440
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