Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKDGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQS-LNLSVSPLKGKIGNNKDGLEY-LLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 2PVU Chain:A ((38-265)) | -----------------------GATKKKVVVGTDAAFAPFEYMQKGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGISGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLFGK-----GPHIKKFE-T--TVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQV--IEDPK--NFASEYYGMIFPK-N--SELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLDRLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73950 for 1855 contacts (-39.9/contact) +
2D Compatibility (PS) -24218 + (NN) -7661 + (LL) 1936
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -119943.0 ( -64.66 by residue)
QMean score : 0.441
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