Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEG---IMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFA---MEGDIILAEPQALVGFAGRRVIETTVRED------------------LPEGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 1X0U Chain:A ((278-510)) | ---------------------------------------------------VEQIVPN-DAAKPYNMREIIYKIVDNGEFLEVHKH------------------------WAQNIIVGFARIAGNVVGIVANNPEEFGGSIDIDAADKAARFIRFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKM---LYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKTKREYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137493 for 1754 contacts (-78.4/contact) +
2D Compatibility (PS) -22574 + (NN) -10843 + (LL) 4384
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -177026.0 ( -100.93 by residue)
QMean score : 0.427
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