Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKQAETLTSLEQVLKQIKYSLDSYYSFCVKKGFVLKVIPVRENIEEVSYLLNMIESQKDTEISTYYVDKLSKQLKEFVKKLNSWEVKPLFTSEQLSKLTTYSTFLENKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4XDN Chain:A ((24-640)) | GDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFH---------YKELKNILLLLQSVSYIV--NCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQTLLKGAVVLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNPIWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVNRFKLKKALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2521 for 539 contacts (-4.7/contact) +
2D Compatibility (PS) -9604 + (NN) 2212 + (LL) 992
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -12521.0 ( -23.23 by residue)
QMean score : 0.332
|
|
|