Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MQEFIANGRVASIPDDAVGRTANGHVSFKFEFVCDSSQQDQEGKGLPAFFHVQVYGKQAEIMAQSLSKGLPILIKGEIIQRPYTNQQGQRRTFQYISPSQHDGITFLESKEATKKRKQGRFTSQAVTSPTLAYSEPVDADEPF
1KAW Chain:A ((3-112))
RGVNKVILVGNLGQDPEVRY----MAVANITLAT---SE------SEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQML------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42727 for 631 contacts (-67.7/contact) +
2D Compatibility (PS) -10273 + (NN) -3066 + (LL) 2468
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -59448.0 ( -94.21 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KAW-query.scw
PDB file :
Tito_Scwrl_1KAW.pdb
: