Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
1TU3 Chain:F ((21-66)) | -----------------------------------------------------------------AQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILN----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3787 for 193 contacts (19.6/contact) +
2D Compatibility (PS) -5119 + (NN) -1726 + (LL) 9972
1D Compatibility (HY) -3200 + (ID) 450
Total energy: 3264.0 ( 16.91 by residue)
QMean score : 0.626
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