Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MKKFAKEYPTTVLLVSLTT-----LVF---LLMQLTYGSQA-ESSQVIFQFGGIQGDYLKAYPTNLWRLI-SPIFVHI-----GWEHFLLN----GLALYFVGQMGESIWGSLRFLILYILSGLMGNIFTLFFTPHVVAAGASTSLFGVFSAIAIAG-YFGK--------NPYLKQVGKSYQVMIL-----LNLFFNIFTPGVSLAGHVGGL-----------VGGVLVA------IFLTKQNGSLLF-----KTWQSILAL---------MIFIIVSISLI----GLSLV-------- |
2XBG Chain:A ((38-345)) | AIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVTDLTAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218483 for 1596 contacts (-136.9/contact) +
2D Compatibility (PS) -24297 + (NN) 4059 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -247771.0 ( -155.24 by residue)
QMean score : 0.011
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