Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKL-GRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDPVNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDGKSFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETG----------RPGY---GLYDRALGATYLSGLYEAVIKGSK |
| 3VNI Chain:A ((18-290)) | ----------DYKYYIEKVAKL-GFDILEIAASPL---PFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPI-----------------------------------DY----------------TKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFE-----NYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEE-DSIGGAIRTAGS--YLGHLHTGECNRK--------VPG--RGRIPWVEIGEALADIGYNGSVVMEPFVRMGGTVGSNIKVWRDISNGADEKMLDREAQAALDFSRYVLEC------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145709 for 2093 contacts (-69.6/contact) +
2D Compatibility (PS) -27866 + (NN) -9370 + (LL) 4840
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -186505.0 ( -89.11 by residue)
QMean score : 0.433
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