Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGNELGAGPWFRELRDMGLDAVIVSDPALIVICATEAPGLEIHLSTQASSTNYETFEFWKEMGLTRVVLAREVTMAELAEIRKRTDVEIEAFVHGAMCISYSG--RCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSLKIEGRMKSIHYVSTVTNCYKAAVDAYMESPEAFEAIKEDLIDELWKVAQRELATGFYYHTPTENEQLF--GARRKIPQYKFVG-EVVSFD----NAKMEATIRQRNVIMEGDRVEFYGPGFRHFECFIDGLRDAEGNKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA |
| 1URO Chain:A ((10-366)) | -GFPELKNDTFLRAAWGEETDYTP------VWCMRQA-------GRYL-------PEFRETRAAQDFFSTCRSPEACCELTLQPLRR----FPLDAAIIFSDILVVPQA---LGMEVTMVPGKGPSFPEPLREEQDLER---LRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVE------GGGSSTMAQAKRWLYQR----------PQASHQLLRILTDALVPYLVGQVVAGAQALQLFESH------------------AGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVP---MIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPH---------RYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97170 for 3026 contacts (-32.1/contact) +
2D Compatibility (PS) -37238 + (NN) -8934 + (LL) 5152
1D Compatibility (HY) -7200 + (ID) 2500
Total energy: -147890.0 ( -48.87 by residue)
QMean score : 0.249
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