Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIGSVGSDFF-KARGMNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNELFDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTESLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE |
1E79 Chain:G ((1-272)) | --ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEK----------------ADIKTPELIIGVSSDRGLCGAIHSSVAKQMKSEAAN----LKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYE-FDEGSIIFNRFRSVISYKTEEKPIFSLDTISSAESMS-------IYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54765 for 1957 contacts (-28.0/contact) +
2D Compatibility (PS) -28109 + (NN) -5939 + (LL) 2040
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -104823.0 ( -53.56 by residue)
QMean score : 0.460
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