Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHINITLDMGETSKDLRIPLKISVKQLVMELDSIFSRTERRTKYQLRVINKGILLGENDILAHHPVTTGDRIRIEEFY
2KD0 Chain:A ((13-82))
----IKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVL--PRGQKLI--FKGKVLVETSTLKQSDVGSGAKLMLMASQ
General information:
TITO was launched using:
RESULT:
Template:
2KD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41541 for 471 contacts (-88.2/contact) +
2D Compatibility (PS) -7129 + (NN) 108 + (LL) 824
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -53038.0 ( -112.61 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_2KD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KD0-query.scw
PDB file :
Tito_Scwrl_2KD0.pdb
: