Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKK---GVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIK--EEENYFNYIGPQANIDH-IQLQMPGHHQVSNASIAITTSLLLRDKYPKLTLQTIKDGLE-MTKWVGRTELIF----PNVMIDGA-HNNESVDALVQVIKKYQQKNVHILFAAI-NTKPIESMLESLSSIA-PVSVTSFDYPKSINLDKYPK--A-YTRVSDWKKWLH-DINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 3LK7 Chain:A ((111-437)) | -------------------------------------ESQLIGITGSNGKTTTTTMIAEVLNAGG-QRGLLAGNI-----------GFPAS--E----------------------------V------VQ-AAN-DKDTLVMELSSFQL-MGVKEFRPHIAVITNLMPTHLDYHG-SFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELA----KTTKATIVPFSTTEKVDGAYVQDKQ-LFYKGENIMSVDDIGVPGSHNVENALATIAVAKLA-----GISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD---NTKVILIAGGLDRGNEFDELIPDITG-LKHMVVLGESASR-VK-RAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFID |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158798 for 2596 contacts (-61.2/contact) +
2D Compatibility (PS) -31889 + (NN) 1312 + (LL) 9456
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -191819.0 ( -73.89 by residue)
QMean score : 0.370
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