Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATPS----AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYAS-SEDNSVSQVTEFTKYAQKAGLEVLKYS--V--PSTNEIKTSMSVM-TKKVDAVFVPQDNTIASAFRTVIVAANQ--ANIPVYSSVDTMVEQ---GSIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 2O20 Chain:A ((62-313)) | -----------------------------------RTTTVGVILPTITSTYFAAITRGVDDIASMYKYN-----MILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKN--SRTPVVLVGTI-DGD---------KEIPSVNIDYHLAAYQSTKKLIDS--GNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNYSYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLVLDHEIFSRRSTK------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63211 for 1891 contacts (-33.4/contact) +
2D Compatibility (PS) -25714 + (NN) -13444 + (LL) 5396
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -104273.0 ( -55.14 by residue)
QMean score : 0.469
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